PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr21089.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 580aa MW: 64676.7 Da PI: 4.7364

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr21089.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.5	3.9e-51	27	150	2	125
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ppGfrFhPtdeelv +yLk+k+ g++++ +i +vd+yk+ePw+Lp k + +++k+wyfF++rd+ky++g+r+nratk+gyWkatgkd+ + + +++ Dr21089.1 27 PPGFRFHPTDEELVLYYLKRKICGRRIKS-PMIGDVDVYKHEPWELPeKsVLXSGDKQWYFFTPRDRKYPNGSRSNRATKRGYWKATGKDRXISQ-NSKP 124 8***********************999.88**********95346677999*********************************99.999 PP NAM 100 vglkktLvfykgrapkgektdWvmhe 125 vg kktLv+y+grapkg++tdW mhe Dr21089.1 125 VGNKKTLVYYQGRAPKGQRTDWXMHE 150 *************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MGAAPDWHGE MDETHLMGAL GNSKCWPPGF RFHPTDEELV LYYLKRKICG RRIKSPMIGD 60 VDVYKHEPWE LPEKSVLXSG DKQWYFFTPR DRKYPNGSRS NRATKRGYWK ATGKDRXISQ 120 NSKPVGNKKT LVYYQGRAPK GQRTDWXMHE PFYLIIRPSX QDCYALYKVF RKSGPGPKNG 180 EQYGAPFIEE EWHDDETADE CVNSLIDWEP PLXEHDNCDS TQAVXTNVLP IDNLEHLLLQ 240 MSDQLDTDPQ LHEGSAYVSE FVVETEIGSC IVPQSQIKPC SLVDTDTWCE PSVVETSXQN 300 ADSISTCYQP TERPKELSFA CSSGQGQLXA IEEFLEINDI NNSESINRAA DCTGNQNPGH 360 NINGLLYDPD EYFDASMFLA EAMXPLDGTT SGGTYSYFVG FEDETQFHXP HITSDLWTHD 420 QNFTVPTSVE PHQVAMESPS SGALYASTVS NSIEQPLGQV TQELGVSTSW FGSKISAFLD 480 SVPSSPAFAS ENTLINRALE RMSSFGAVQS RMLEQNAQTG RDASAERRRG GLGGGFLFIS 540 ILGGLGAIFW VLIIGAVVKL FKAIGIISHW VRSGMHGAER

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MGAAPDWHGE MDETHLMGAL GNSKCWPPGF RFHPTDEELV LYYLKRKICG RRIKSPMIGD  60
VDVYKHEPWE LPEKSVLXSG DKQWYFFTPR DRKYPNGSRS NRATKRGYWK ATGKDRXISQ  120
NSKPVGNKKT LVYYQGRAPK GQRTDWXMHE PFYLIIRPSX QDCYALYKVF RKSGPGPKNG  180
EQYGAPFIEE EWHDDETADE CVNSLIDWEP PLXEHDNCDS TQAVXTNVLP IDNLEHLLLQ  240
MSDQLDTDPQ LHEGSAYVSE FVVETEIGSC IVPQSQIKPC SLVDTDTWCE PSVVETSXQN  300
ADSISTCYQP TERPKELSFA CSSGQGQLXA IEEFLEINDI NNSESINRAA DCTGNQNPGH  360
NINGLLYDPD EYFDASMFLA EAMXPLDGTT SGGTYSYFVG FEDETQFHXP HITSDLWTHD  420
QNFTVPTSVE PHQVAMESPS SGALYASTVS NSIEQPLGQV TQELGVSTSW FGSKISAFLD  480
SVPSSPAFAS ENTLINRALE RMSSFGAVQS RMLEQNAQTG RDASAERRRG GLGGGFLFIS  540
ILGGLGAIFW VLIIGAVVKL FKAIGIISHW VRSGMHGAER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	2e-78	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr21089.1