PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20605.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 273aa    MW: 29783.4 Da    PI: 6.5273
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20605.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643e-20118168255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f taeeAa a+++a+ +++g
  Dr20605.1 118 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEEAAMAYDRAAYRMRG 168
                8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MAVLDSIRQH LLEDPTGGDV KPCAVSLPQR SYCRTASFGS IVADHWGELP FRADDSDDMV  60
VFGVLRDAYS HGWLPFGAAA VAVAPEVKIE PVVEPETEPE TKLVKIEIPS VVPAKGKHYR  120
GVRQRPWGKF AAEIRDPAKN GARVWLGTFE TAEEAAMAYD RAAYRMRGSR ALLNFPLRIA  180
TEDVTPVSSP GKRASPEPAS SSSSSEKGSP KRRKRGEAAA AAAAMFGLRE FHYDSNDEDK  240
VKEKAKFDKD DNESVTVHSG GLVNSQDQSQ ADR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212242RRKRGEAAAAAAAMFGLREFHYDSNDEDKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-43ERF family protein