PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr20067.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | WRKY | ||||||||
Protein Properties | Length: 251aa MW: 28618.3 Da PI: 4.6105 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 43.3 | 7.4e-14 | 77 | 120 | 19 | 59 |
SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 + rsYYrCt++ gC ++k+v++++edp+v+ itY g H ++ Dr20067.1 77 TKRRSYYRCTHRgssGCLATKQVQKTDEDPSVLRITYYGVHSCT 120 4679*******99999*************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MENQRRCLLD ELNRAQGLAR QLQASLGXPS TIPVCKNLAQ EILSCIEKAV CLAKPSPLED 60 YEISEQGTKE QKRRDLTKRR SYYRCTHRGS SGCLATKQVQ KTDEDPSVLR ITYYGVHSCT 120 HQRPTEVQIS CMKKEEEEEE EEEEEEEQLQ HKGLKQDNHN NEQQQQIQLN IQSFLTSANK 180 PGDEASSSFS FNFDPALGSS SSTTFPQTSS LSKKPELGDY MPEMLDMDFM ADTNFSFVDT 240 SNFFSDDDKR N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 3e-13 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr20067.1 |