PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20065.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 241aa    MW: 27389.3 Da    PI: 8.0981
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20065.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-1883133256
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 y+GVr+++ +g+WvAeIr p +   r r++lg++++ae Aa a+++a+ kl+g+
  Dr20065.1  83 PYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDSAECAAIAYDRAAYKLRGZ 133
                69******9.**********954...5**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MRHQSNSTTE SVCQILLSGT NALDSIFSHL PPPPVAAEPL GSSVYESQTE LLRRFGSESI  60
PRRSTARWIP WLTEIHGDVK KKPYRGVRQR HWGKWVAEIR LPQNRMRVWL GTYDSAECAA  120
IAYDRAAYKL RGZYAQLNFP NLGAGAGEWA ERLXLTVDEK IHASFXRIRQ HRRHRRERRN  180
GTNEEKRVLI VEQTQEAFVS LGASDGQYZS SSAISDEMDG GCLLTGMPSF DPEIIWDVLS  240
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.14e-34ERF family protein