PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr18665.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 428aa MW: 47474.4 Da PI: 6.1028

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr18665.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4.1e-32	250	303	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Dr18665.1 250 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 303 9****************************************************7 PP
2	Myb_DNA-binding	46.6	8.1e-15	251	302	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Dr18665.1 251 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 302 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MIRESEFEEE DDDDDDDDDD DDECVDLSLH ISQPTTNTSX DTTSTSAAGD RELWRRIESL 60 KPHEASTELS LSSSTPSTQT SWRRQTSLPI HHENLPHTHR PGYDGMPFIT TTTTTTTSLE 120 TSMPIKGIPI YNNSSSFPFI AHQISSWPSS SSSSSSSSSS SANLDPMSSF LHPIGGGGGA 180 MMGSSYHKLI AGPARFNCLS PPDPMKSQFS HHHHNHHHHQ YGMGALEASH NMMRSRFMPK 240 LPAKRSXRAP RMRWTSTLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM 300 YRTVKTTDKP AASSGKSDGS GEEDFMSGGG SSSGDLNFRR FIDNQSSDST MQAQDVDSGT 360 RWSNSSRGTW LTSSNDMEGL IRPTFSSQLE ETDDHIRSKD SPVLNQEVKN PSLEFTLGRP 420 DWHNREHD

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MIRESEFEEE DDDDDDDDDD DDECVDLSLH ISQPTTNTSX DTTSTSAAGD RELWRRIESL  60
KPHEASTELS LSSSTPSTQT SWRRQTSLPI HHENLPHTHR PGYDGMPFIT TTTTTTTSLE  120
TSMPIKGIPI YNNSSSFPFI AHQISSWPSS SSSSSSSSSS SANLDPMSSF LHPIGGGGGA  180
MMGSSYHKLI AGPARFNCLS PPDPMKSQFS HHHHNHHHHQ YGMGALEASH NMMRSRFMPK  240
LPAKRSXRAP RMRWTSTLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM  300
YRTVKTTDKP AASSGKSDGS GEEDFMSGGG SSSGDLNFRR FIDNQSSDST MQAQDVDSGT  360
RWSNSSRGTW LTSSNDMEGL IRPTFSSQLE ETDDHIRSKD SPVLNQEVKN PSLEFTLGRP  420
DWHNREHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	3e-59	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr18665.1