PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr18654.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 178aa    MW: 21093.4 Da    PI: 9.5219
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr18654.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.8e-172265146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     + ++T+eE+e+l+  +  +G++ W++Iar+++ gRt++ +k+ w+ 
        Dr18654.1 22 KSPFTEEEEERLLASHXIHGNR-WAAIARHFP-GRTDNAVKNQWHV 65
                     679*******************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MSTRGKSCRL RWFNQLDPRI KKSPFTEEEE ERLLASHXIH GNRWAAIARH FPGRTDNAVK  60
NQWHVIMARR YRERSRVCSR GEAQRQEIIK KRNLDAKNIA SFLDKYCRSV QNYPMINESN  120
MRQNRDSSIE FYDFLQVNND LENAKQGLER VEEQKEEVKE NESKSCVPFI DFFSVGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.14e-42MYB family protein