PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr16754.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | C2H2 | ||||||||
Protein Properties | Length: 227aa MW: 26236.9 Da PI: 8.3638 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20.1 | 1.7e-06 | 88 | 107 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r nL+ H+ Dr16754.1 88 FSCHVCKKTFNRYNNLQMHM 107 89*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MESHNTDPGP LEPLPLINYF LHSSTVHEHL DVNEEEEGDN GVELELGLPI LSSFGNSEKP 60 ETGKQKEEET RWYWIPTPEQ ILTEFTTFSC HVCKKTFNRY NNLQMHMWGH GSEYRQESKL 120 VRGVQPRVVV GLACYCCEEG CKNNIRHPKA KPLKDMRTLR THYKRKHGAK SFGCRRCGRL 180 WAVKGDWRTH EKNCGKVWLC QCGADFKHKR SLTDHIKAFG FGHVSIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34790.1 | 4e-86 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr16754.1 |