PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr16748.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB | ||||||||
Protein Properties | Length: 278aa MW: 31995.5 Da PI: 6.0131 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.4 | 2.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l ++k +G g+W++ +++ g++R++k+c++rw++yl Dr16748.1 14 RGAWTQEEDKILSAYIKAHGEGRWRSLPSRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.7 | 2.4e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eEd+l+++++k+lG++ W++Ia +++ gRt++++k++w+++l Dr16748.1 67 RGNISQEEDDLIIRLHKLLGNK-WSLIAGRLP-GRTDNEIKNYWNTHL 112 7899******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MGRKPCCSRD GLRRGAWTQE EDKILSAYIK AHGEGRWRSL PSRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SQEEDDLIIR LHKLLGNKWS LIAGRLPGRT DNEIKNYWNT HLSKTLIKHG 120 NGHDEHQNKI ETKKEKTLAI VDTNNVVRTK ARRCTSNVFI TTTPQQQQPH FDDHNEEHMN 180 TGVLLHGNEA ANGDENTGHE IESWWDALMD FNMNDDWTWM NEASSPPIHN INVAEAEGDD 240 DDDHHQVMIE SEADETRKPD LDLDLNALAA FLDWETYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 7e-65 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr16748.1 |