PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr16730.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 281aa MW: 32532.8 Da PI: 6.7973

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr16730.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.2	2.4e-47	14	140	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelv 100 pGfrF+Pt+eel+++yL+k v gkkl++ ++i ++++y+++Pw+Lp +k +e+ewyfF++rd+++a+g r+nr+t++g+Wkatg+d+++ s+ ++l+ Dr16730.1 14 PGFRFQPTEEELLDFYLRKVVLGKKLHF-DIIGTLNLYRYDPWELPGLAKIGEREWYFFVPRDRRHANGGRPNRTTERGFWKATGSDRPIRSAvdPKRLI 112 9***********************99.99***********8888899***********************************99877889 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+grap+g ktdWvm+eyrl Dr16730.1 113 GLKKTLVFYNGRAPRGCKTDWVMNEYRL 140 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MENMERNVSE LDLPGFRFQP TEEELLDFYL RKVVLGKKLH FDIIGTLNLY RYDPWELPGL 60 AKIGEREWYF FVPRDRRHAN GGRPNRTTER GFWKATGSDR PIRSAVDPKR LIGLKKTLVF 120 YNGRAPRGCK TDWVMNEYRL PDHCGSSSNS SSFHSPKEDI VLCKIYRKAT SLKELEQRAA 180 MEADARASQS SVSVTDTLSS SDQEVQIQKP LMVDEKDNVV KVAHVNEDDE HVSLAQDRLV 240 NLPDIQVPRY NGMEWMQDPF LTQLRSPWVE QWSPLANMLN F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	9e-90	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr16730.1