PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr16433.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 349aa MW: 38583.4 Da PI: 6.717

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr16433.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.6	1.2e-32	100	154	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+g+t++hvkSHLQkYRl Dr16433.1 100 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGITIYHVKSHLQKYRL 154 79****************************************************8 PP
2	Myb_DNA-binding	54.8	2.1e-17	102	153	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++++vda++qlGg+ t+k + r mg g t +++ks++qky+ Dr16433.1 102 RLRWTSDLHDRFVDAITQLGGPdraTPKGVLRVMGvPGITIYHVKSHLQKYR 153 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MMAWCGSGSG SGSGTGQNRT LFGFEGYFVA LWSEASLLRL LVQGCLVWSE VTKLFSIMYH 60 AKKFSSLPMV HHKVPSSEEL ANVGSCGSPA KNPSASVGGK QRLRWTSDLH DRFVDAITQL 120 GGPDRATPKG VLRVMGVPGI TIYHVKSHLQ KYRLAKYLPE SPADGSKEDK KDSGDALCNM 180 DSAPGVEIDE ALKMQMEVQK RLREQLEVQR QLQLRIEAQS RYLQKIIEEQ QKLGGTLMAC 240 DSSAANEKRK VSEPPSKLQD SLSELTSGKK QRLGDQSKDT EQVLLPLTEE PESDDFVGQW 300 NRDLNGTSTL NFRLDTEMDS SKGCHNSDRQ EHGFAENESQ NISLSSSSR

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MMAWCGSGSG SGSGTGQNRT LFGFEGYFVA LWSEASLLRL LVQGCLVWSE VTKLFSIMYH  60
AKKFSSLPMV HHKVPSSEEL ANVGSCGSPA KNPSASVGGK QRLRWTSDLH DRFVDAITQL  120
GGPDRATPKG VLRVMGVPGI TIYHVKSHLQ KYRLAKYLPE SPADGSKEDK KDSGDALCNM  180
DSAPGVEIDE ALKMQMEVQK RLREQLEVQR QLQLRIEAQS RYLQKIIEEQ QKLGGTLMAC  240
DSSAANEKRK VSEPPSKLQD SLSELTSGKK QRLGDQSKDT EQVLLPLTEE PESDDFVGQW  300
NRDLNGTSTL NFRLDTEMDS SKGCHNSDRQ EHGFAENESQ NISLSSSSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	5e-54	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr16433.1