PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15790.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB_related

Protein Properties

Length: 744aa MW: 82090.1 Da PI: 6.8798

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15790.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.5e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ Dr15790.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence
MDACSSGEEF VVKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEASLKG IPLGQAHDID IPPPRPKKKP SNPYPRKVGS GNISSSAEVK 120 DRRKSLYSPS ASLQIQATGK VAPVEKPVTE TQQRKKETSE DGSCSEVLDL FQVLPSVPIS 180 YAXENCSNPY SFREFVPLLK ETSDKTLVDK SSMTINSNVE TGSDDAAIYH KNTERMHGIC 240 KNMQAESITE EIAVMLKKPE MPVSSIKDNP QGFNSYQKYV VDQAEENSSA KCRETADPQS 300 KIHXXVXNLG VPSNVNPFTT PIIPGIPQAY ASSATIHPLV QXVPPFTQFC SIPGAAYRSF 360 MNISSTFSSL ILSTLLQNPA VHAAACLAAS FFPSSGADAA AAAAAANSTT AEVFGGEVPG 420 RHMNAIPSMT AIAAATVAAA TAWWATHGLL PLFPPHLQSD LMFTHPTVTT TVGNTDIAQA 480 SDIIRERDDE FRPSAQEDRK GEQSHLPRSQ HDSSSTSDSD ESEQGERSQC XSDLKDLKAN 540 NMFKLQPQTE LHDSINTCKK KAYRSSCGSN TPSSSEKDFA NAXEKAKXEE XKEASQDHVS 600 NETNHRRNRS SGTINDAWKE VSEEGRLAFQ ALFRRNVLPQ SFSLXHSDEK GAATAXPVDL 660 NRMXYXSNDL DQTEESQTXE TMIISNGNSA KRCIISEPEH AKLKAHRTGF KPYKRCSMEA 720 KENRVNAGED QVNKRIRLEA EASN

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence

MDACSSGEEF VVKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEASLKG IPLGQAHDID IPPPRPKKKP SNPYPRKVGS GNISSSAEVK  120
DRRKSLYSPS ASLQIQATGK VAPVEKPVTE TQQRKKETSE DGSCSEVLDL FQVLPSVPIS  180
YAXENCSNPY SFREFVPLLK ETSDKTLVDK SSMTINSNVE TGSDDAAIYH KNTERMHGIC  240
KNMQAESITE EIAVMLKKPE MPVSSIKDNP QGFNSYQKYV VDQAEENSSA KCRETADPQS  300
KIHXXVXNLG VPSNVNPFTT PIIPGIPQAY ASSATIHPLV QXVPPFTQFC SIPGAAYRSF  360
MNISSTFSSL ILSTLLQNPA VHAAACLAAS FFPSSGADAA AAAAAANSTT AEVFGGEVPG  420
RHMNAIPSMT AIAAATVAAA TAWWATHGLL PLFPPHLQSD LMFTHPTVTT TVGNTDIAQA  480
SDIIRERDDE FRPSAQEDRK GEQSHLPRSQ HDSSSTSDSD ESEQGERSQC XSDLKDLKAN  540
NMFKLQPQTE LHDSINTCKK KAYRSSCGSN TPSSSEKDFA NAXEKAKXEE XKEASQDHVS  600
NETNHRRNRS SGTINDAWKE VSEEGRLAFQ ALFRRNVLPQ SFSLXHSDEK GAATAXPVDL  660
NRMXYXSNDL DQTEESQTXE TMIISNGNSA KRCIISEPEH AKLKAHRTGF KPYKRCSMEA  720
KENRVNAGED QVNKRIRLEA EASN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	2e-48	MYB_related family protein

Link Out ? help Back to Top
Ensembl	Dr15790.1