PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr15276.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB_related | ||||||||
Protein Properties | Length: 198aa MW: 22827.7 Da PI: 6.7171 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.2 | 5.9e-16 | 22 | 65 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE +l+ +++ ++G++ W++Ia++++ gRt++++k++w++ Dr15276.1 22 RGNLTLEEKLLIFELHSKWGNR-WSRIAQHLP-GRTDNEIKNYWRT 65 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MSEKKGALKL RWLNYLKPDV KRGNLTLEEK LLIFELHSKW GNRWSRIAQH LPGRTDNEIK 60 NYWRTRVQKQ AKHMKIDGIR CYWNSSSSNT NNNIIMNQTM HENPQEFINP AAMQIQDELQ 120 NMVLSSFSNS GDHQQHYHNS INELQTLDLA FMADSSNGAV ADQDIDAGNL IEMAHGQWMT 180 CGLLENYCMN GVAFDQLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 1e-38 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr15276.1 |