PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15262.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 298aa    MW: 32684.4 Da    PI: 4.5609
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15262.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-17109159155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                s++kGVr+++ +g+W+AeIrdp    +r  r++lg++ t+eeAa a+  a +++e 
  Dr15262.1 109 SKHKGVRYRP-WGKWAAEIRDP----IRgVRVWLGTYATEEEAALAYQTASRRIEA 159
                79********.**********7....246******************999988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MPGPQRQLLN QDPMTRKPRK TPLRSKSDPK STLKRIRIVF SDPDATDSSS DEDSVPEPRI  60
KQTRRVLREI PISPFSTPLP DSSSCSKPRK TLATLRAKNT GSSTSTGSSK HKGVRYRPWG  120
KWAAEIRDPI RGVRVWLGTY ATEEEAALAY QTASRRIEAE KRGFVASDAF SGGASSDSGL  180
SDPETDPNPN AFSVPSPSSV LDVSTDGFPI DGQDHPVKEA DANVMPVTDF FSKDESEMLL  240
SDFGLESEPD PLMGLVAVED FVVLGDLPVL TLWDDRTNGS DPIALEFADL DDWMNFDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-15ERF family protein