PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15065.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 421aa    MW: 46917.3 Da    PI: 9.1318
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15065.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.96.6e-31199257259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Dr15065.1 199 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 257
                699************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
MGLVVVNAWS CSLRSLALHG LVGPVQIIPS EKATLPVGRI PAFWYLVVWX VSTILRFCSK  60
ARKEVSIPPP PPQLLLLDTS YRIRPVKIMR PMKVKWWSQS QIRKDVXEKG DPLMENGQGD  120
LADIVRASGR VGGNDIDLSS VMSNDXQFIP SEPPVLGDIQ ISSPRTPGIK RRKSQAKKVV  180
CIPAPAAANS RTSGEVVPSD LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC SARKQVERSR  240
TDPNMLVITY TSEHNHPWPT QRNALAGSTR SQTSSKNVTS SSTQKNNHKQ VVNLKEEPKD  300
TTSSSSTPLV KEEGGEFVDK AMDASDHDQD RLDQMFVGSY KPLIPECNHP DDFFADLAEL  360
DPDPMSLIFS KGIDDVDVEQ DQRERNNNNN NNNNNNNKSI DPFNIFDWGV MNSFGESKRG  420
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.13e-77WRKY family protein