PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14517.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 274aa    MW: 30547.4 Da    PI: 9.3059
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14517.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.8e-30130189159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rsaed ++++ tYeg+Hnh+
  Dr14517.1 130 VKDGYQWRKYGQKVTRDNPSPRAYFRCSFApSCPVKKKVQRSAEDRSILVATYEGQHNHR 189
                58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MDNSISLGLG LGLRPLDDLR SEIPINVLEA ELSRMSGENK RLSDMLSVMN AKCSSLQGQL  60
LDLMSSPSSE KKRKSPSSDD NSMNKFYSSS SHLESPSSED TCKRAIDHVY RAKVYKSYVR  120
RDPSDTSLIV KDGYQWRKYG QKVTRDNPSP RAYFRCSFAP SCPVKKKVQR SAEDRSILVA  180
TYEGQHNHRN TLIAGTKTIG TEHCPYSISV QSSRPEIFLD LTPKSSNQEL ESQEFQRLLV  240
EQMASSITKD PSFTAALVSA ISGRVNLQIS PGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-59WRKY family protein