PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr14234.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 626aa MW: 69595.5 Da PI: 7.3073

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr14234.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	372	409	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + Dr14234.1 372 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 409 554459******************************88 PP
2	BELL	115.7	2.4e-37	234	305	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+kkakL+++l+eV++rY+qy +q+q+v+ssFe+vag gsa+ YtslAlk+iS++Fr+L+daia+qi Dr14234.1 234 EKQDLQMKKAKLVTMLDEVEQRYRQYSQQMQIVVSSFEVVAGQGSARTYTSLALKTISKQFRSLRDAIAGQI 305 6899*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MATFYHGAPE IQSDSLQTLQ FMNPGFSGYS DTSAPANMVL LNSSTLSSLN PVSLSQSQQQ 60 HFVGIPLQTT TQETANPHEI STMNGFIPRL HYNLWTPTPT NNTIDISTSS MPLAQQGSLS 120 LSLSSQQQAP YHYHSEPAEI HTTPVSSSVS FINGGIMSSS QSHVLMGSKY LKVAQQLLDE 180 VASVGKCGVV EGDDQTVKKS SSSKVSGYNS KDQSDKKEEG ETSVKRAVDL TTVEKQDLQM 240 KKAKLVTMLD EVEQRYRQYS QQMQIVVSSF EVVAGQGSAR TYTSLALKTI SKQFRSLRDA 300 IAGQIRGVSK SLGEDECLLG SKAEGGSRLR FVDHHLRQQR ALQQLGMMQH NAWRPQRGLP 360 ERSVSVLRAW LFEHFLHPYP KDSDKIMLAK QTGLTRSQVS NWFINARVRL WKPMVEEMYM 420 EETKEQEQNN ADDKAIKGDA NENSMSQSGN SPGRTEQDDN RKPSPMSVNI LPQAIYQNNE 480 AVVMHSKLKK PRSTDEISGE QGYSVITGNM NHGGSFGTYH HHHHHQVGEF ERFEGEPFTQ 540 RFSGNGVALT LGLSHCENLS MSGGQPTYIP FGRRLEMSSS SSNNNNNNHN NNDSNQTMVH 600 QSNGYDNINL QSRKRLAAQL LPDYVS

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MATFYHGAPE IQSDSLQTLQ FMNPGFSGYS DTSAPANMVL LNSSTLSSLN PVSLSQSQQQ  60
HFVGIPLQTT TQETANPHEI STMNGFIPRL HYNLWTPTPT NNTIDISTSS MPLAQQGSLS  120
LSLSSQQQAP YHYHSEPAEI HTTPVSSSVS FINGGIMSSS QSHVLMGSKY LKVAQQLLDE  180
VASVGKCGVV EGDDQTVKKS SSSKVSGYNS KDQSDKKEEG ETSVKRAVDL TTVEKQDLQM  240
KKAKLVTMLD EVEQRYRQYS QQMQIVVSSF EVVAGQGSAR TYTSLALKTI SKQFRSLRDA  300
IAGQIRGVSK SLGEDECLLG SKAEGGSRLR FVDHHLRQQR ALQQLGMMQH NAWRPQRGLP  360
ERSVSVLRAW LFEHFLHPYP KDSDKIMLAK QTGLTRSQVS NWFINARVRL WKPMVEEMYM  420
EETKEQEQNN ADDKAIKGDA NENSMSQSGN SPGRTEQDDN RKPSPMSVNI LPQAIYQNNE  480
AVVMHSKLKK PRSTDEISGE QGYSVITGNM NHGGSFGTYH HHHHHQVGEF ERFEGEPFTQ  540
RFSGNGVALT LGLSHCENLS MSGGQPTYIP FGRRLEMSSS SSNNNNNNHN NNDSNQTMVH  600
QSNGYDNINL QSRKRLAAQL LPDYVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-110	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr14234.1