PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr13435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 268aa MW: 30429.7 Da PI: 4.583 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.2 | 1.9e-20 | 65 | 118 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e+++eLA++lgL+ rqV vWFqNrRa++k Dr13435.1 65 KKRRLTPEQVRLLERSFEAENKLEPERKTELARQLGLQPRQVAVWFQNRRARWK 118 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 133.8 | 6.2e-43 | 64 | 156 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqv+lLE+sFe+e+kLeperK+elar+LglqprqvavWFqnrRAR+ktkqlE+d+++Lk++yd+l +++++L++++e+Lr+++++ Dr13435.1 64 EKKRRLTPEQVRLLERSFEAENKLEPERKTELARQLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASYDSLLADRDALRQDNERLRSQVAT 156 69**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MMDSGGRLIF DSSTDSHGRM LILGGGSQIF HAGVDDGVGK RQRPFFTLPD ELLEEEYYDE 60 QLPEKKRRLT PEQVRLLERS FEAENKLEPE RKTELARQLG LQPRQVAVWF QNRRARWKTK 120 QLERDFDRLK ASYDSLLADR DALRQDNERL RSQVATLSEK LQGKEVAPGI VDVKQDVHAA 180 EIIEEKVPVK AEDRLSIGSG GSAVVDGERN QLVDSSGESY FHDEYQGGCC IVGEEDDGSD 240 DGCSYAVFAN QHHPEPDPDQ LGWCFFWN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 121 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 2e-63 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr13435.1 |