PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr13338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB | ||||||||
Protein Properties | Length: 228aa MW: 26372.4 Da PI: 9.9107 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.3 | 7.6e-18 | 22 | 67 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G+ +W++Ia++++ gR++k+c++rw++ Dr13338.1 22 RGHWRPGEDEKLRQLVEKYGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 67 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 61.1 | 2.3e-19 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ Dr13338.1 74 RRPFTEEEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 117 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MELSGGGGSD DGKMTMTTMC SRGHWRPGED EKLRQLVEKY GPQNWNSIAE KLQGRSGKSC 60 RLRWFNQLDP RINRRPFTEE EEERLLAAHR IHGNKWALIA RLFPGRTDNA VKNHWHVIMA 120 RRQRERSKIY SKRIHDQHHH HLLESTSRSF GFYSGFGAVM QLNYKPNSSR XDGYVYEAMN 180 KFELFRIGDS SSGLLNLGSD KQKEQEDESL QQKKDAPFID FLGVGITS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 4e-67 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr13338.1 |