PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr13333.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 943aa MW: 104844 Da PI: 4.5354

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr13333.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151	5.6e-47	7	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 l+pGfrFhPtd elv++yLk k+ +k l++ ++i+e+d+yk+ PwdLp +k+++ ewyfF++rd kyatg+r++rat+ gyWk+tg+dk Dr13333.1 7 LAPGFRFHPTDAELVCFYLKGKIMQKALPC-KIIAEIDLYKFPPWDLPGlsfslgaaksFLKSKDLEWYFFCPRDLKYATGSRTKRATDLGYWKTTGRDK 105 579*************************.89***********558999887765555777****************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ k+ +vg++ktLvf++g+ap g++tdWv+ eyrl Dr13333.1 106 AIVN-KSDTVGMRKTLVFHEGKAPGGSRTDWVIYEYRL 142 .9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 943 aa Download sequence
MMANTSLAPG FRFHPTDAEL VCFYLKGKIM QKALPCKIIA EIDLYKFPPW DLPGLSFSLG 60 AAKSFLKSKD LEWYFFCPRD LKYATGSRTK RATDLGYWKT TGRDKAIVNK SDTVGMRKTL 120 VFHEGKAPGG SRTDWVIYEY RLKDKDLTDT GNLQDKLVLC KLFQKSGRGP KNGEHHGAPF 180 NEEEWEDDDT GNDYSGSVSC MVSAQDPHDD QATMLEPGPP VPVDSGIGDA HAVSGTGEAH 240 AVIGTGEVSS LPDGEEELWT ELIEALRYSP DNLGDILGEA PGSHVLHCQT SAAGTHLGGI 300 YDGLYDLPPP AEPNEPNYGT YFNTEEFLMD IDPSELYVHD PFENLAIFQN SNGHGVSALA 360 VDDTPPPAAA ITDPCQCPNT NHNQYTLNVE INAFGEDDNQ QFEALFHEFL KDPVWQTEYG 420 ANVCSTSGAG GXDSKKSFFY SDPSCSNRYP DSTLRRAIGA VKDQTSISIA KVSNSTTISD 480 LDVAIVKATR HDEYPAEERH IREILSLTCY SRAYVHSCVS TLSRRLSKTR SWTVALKSLI 540 LIHRLLSDGD PXYEQEIFFA TRRGTRMLNM SDFRAARFNR VVCVALQPLL KESQQIYYDL 600 NEIMSIFIDR FMEMEIPECV RVHSIFTRLS KQLEELDAFY NSCKSSGISR PSDFPQIERI 660 TSKKLEVMDE FIKERSNPVK LNPEPEQSPE EEEEEKEEEG DQNHYSNSIK ALPPPTSNEA 720 VIKNEEXRIQ EEKKNKNEIK LAQEEEGDLL NLSDELSTAN KQHDHDMLAL ALFDDGTTTT 780 TTDAPAWEAF KDEPADWETA LVQSASVLSG QRSELGGGFD TLVLNGMYVH ADQQVKYVSS 840 GAGQGSASSV ALXLMSSNLL ALPAPAGGXG AGEXVDPFAA SLEVPAPAYV QMSEMEKKQR 900 LLMEEQRMWQ QYANDGMQGH LGMVKLQQYP QFQYMGGSGY SYF

Sequence ? help Back to Top

Protein Sequence Length: 943 aa Download sequence

MMANTSLAPG FRFHPTDAEL VCFYLKGKIM QKALPCKIIA EIDLYKFPPW DLPGLSFSLG  60
AAKSFLKSKD LEWYFFCPRD LKYATGSRTK RATDLGYWKT TGRDKAIVNK SDTVGMRKTL  120
VFHEGKAPGG SRTDWVIYEY RLKDKDLTDT GNLQDKLVLC KLFQKSGRGP KNGEHHGAPF  180
NEEEWEDDDT GNDYSGSVSC MVSAQDPHDD QATMLEPGPP VPVDSGIGDA HAVSGTGEAH  240
AVIGTGEVSS LPDGEEELWT ELIEALRYSP DNLGDILGEA PGSHVLHCQT SAAGTHLGGI  300
YDGLYDLPPP AEPNEPNYGT YFNTEEFLMD IDPSELYVHD PFENLAIFQN SNGHGVSALA  360
VDDTPPPAAA ITDPCQCPNT NHNQYTLNVE INAFGEDDNQ QFEALFHEFL KDPVWQTEYG  420
ANVCSTSGAG GXDSKKSFFY SDPSCSNRYP DSTLRRAIGA VKDQTSISIA KVSNSTTISD  480
LDVAIVKATR HDEYPAEERH IREILSLTCY SRAYVHSCVS TLSRRLSKTR SWTVALKSLI  540
LIHRLLSDGD PXYEQEIFFA TRRGTRMLNM SDFRAARFNR VVCVALQPLL KESQQIYYDL  600
NEIMSIFIDR FMEMEIPECV RVHSIFTRLS KQLEELDAFY NSCKSSGISR PSDFPQIERI  660
TSKKLEVMDE FIKERSNPVK LNPEPEQSPE EEEEEKEEEG DQNHYSNSIK ALPPPTSNEA  720
VIKNEEXRIQ EEKKNKNEIK LAQEEEGDLL NLSDELSTAN KQHDHDMLAL ALFDDGTTTT  780
TTDAPAWEAF KDEPADWETA LVQSASVLSG QRSELGGGFD TLVLNGMYVH ADQQVKYVSS  840
GAGQGSASSV ALXLMSSNLL ALPAPAGGXG AGEXVDPFAA SLEVPAPAYV QMSEMEKKQR  900
LLMEEQRMWQ QYANDGMQGH LGMVKLQQYP QFQYMGGSGY SYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-67	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr13333.1