PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr12963.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 607aa    MW: 67842.9 Da    PI: 6.5571
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr12963.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.95.4e-25268324259
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                +Dgy+W KYG+K+vkg ++pr YYrC++ +Cp+kkkve+s+ + ++++i+Y+g Hnh 
  Dr12963.1 268 EDGYSWWKYGZKQVKGCDYPRTYYRCAHLNCPMKKKVEQSH-EHRITKIIYKGAHNHI 324
                8****************************************.9**************5 PP
2WRKY102.52.4e-32427485159
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++ Yeg+Hnh+
  Dr12963.1 427 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCSVRKHVERASNDLKSVITSYEGKHNHD 485
                59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
MDGWDDNSVI GGWPPTSISN FLNDDFSLKF TPLIEDDHDV PRMKTDKQKL DSSTAKEDDG  60
FRFSSGPSVE ISKIDVHKPI ARSGLSERRP AWSGFTTPKI NTTRIISAKL DSTTSEVRSP  120
YLTISPGLSP TTLLDSPKLL SNMAQLSPTT GKLSYNKYDN TELVSATRIP DKARDHHTLE  180
EVPELFAFKS HPEPYSSYFA SADNKSLTSI GETAITFQTN LNLQTGLSNS SEISNPLEKV  240
IDSFQSSDNS PPLNDQKDAE VIIAEQAEDG YSWWKYGZKQ VKGCDYPRTY YRCAHLNCPM  300
KKKVEQSHEH RITKIIYKGA HNHIKPPLSH WVPAPDYLEN MASQIDLDGN LLTTTTQDYN  360
QCATSEFGDP SISSDEEDDW GACDGEKEEA ESKRRKIDAS VIDMSTASSG AHEPRVVVQT  420
TSEIDVLDDG YRWRKYGQKV VKGNPNPRSY YKCTNPGCSV RKHVERASND LKSVITSYEG  480
KHNHDIPAAR GNNHSNSTSS IATTSAISRP QLLRKRPELT LAQDSLTTSD GFSLAIRQQG  540
LNNLGVMELS MGTPMKVSEL HQVHPLLSVN GKYYRVNNTK QRTNQMPLED SGQTKSRMQQ  600
NHWFITR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.14e-98WRKY family protein