PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr12886.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 284aa MW: 31983.2 Da PI: 5.9194

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr12886.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.9	4e-53	22	150	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 lppGfrFhPtdeel+++yL kv + ++ i evd++k+ePw+Lp +k +ekewyfFs rd+ky+tg r+nrat+sgyWkatgkd+ev ++ +g+l Dr12886.1 22 LPPGFRFHPTDEELITFYLVSKVFNGGINGV-DIMEVDLNKCEPWELPDLAKMGEKEWYFFSLRDRKYPTGLRTNRATNSGYWKATGKDREVRRTaTGAL 120 79***********************9994.4***********8888899*********************************99878899 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 +g+kktLvfy+grap+gekt+Wv+heyrle Dr12886.1 121 IGMKKTLVFYRGRAPRGEKTKWVLHEYRLE 150 **************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MSSSMAEVVW ELFGEDITEQ GLPPGFRFHP TDEELITFYL VSKVFNGGIN GVDIMEVDLN 60 KCEPWELPDL AKMGEKEWYF FSLRDRKYPT GLRTNRATNS GYWKATGKDR EVRRTATGAL 120 IGMKKTLVFY RGRAPRGEKT KWVLHEYRLE GELSCRHTYK EEWVMCRILH KSGDKKNSYH 180 PNQTGFQDPS TSTSFIDLQT LENPTQSTLP LHISNNNTTN HPSLPLVAQE EEVTVSSFIE 240 AYLQNPLIYG MGLGPLGVYL GAPPSDELPL MGPTPFGASG PSVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	4e-96	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr12886.1