PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr12801.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 778aa MW: 86301.6 Da PI: 7.9658

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr12801.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101	7.1e-32	161	217	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers ++++ ei+Y+geHnh+k Dr12801.1 161 DGYNWRKYGQKQVKGSEYPRSYYKCTHPSCPVKKKVERSL-EGHIAEIVYKGEHNHPK 217 9*************************************.*************85 PP
2	WRKY	59.6	5.8e-19	324	359	2	37
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEE CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkk 37 +Dgy+WrKYGqK+vkg+++prsYY+Ct +C+ +++ Dr12801.1 324 SDGYHWRKYGQKVVKGNPYPRSYYKCTGLKCKERRR 359 7*******************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 778 aa Download sequence
MEDKNKEKTV VVKPVPWRPR SDFKSSKHTT TAGNVSSPSS STEATNIIRP KTVRLRPSSN 60 HFQAEIGPFL DHLSEPGAHD FSNLASKADA SSFLPNLGNV DVGHEEMFVE TMVQDQVLDR 120 SKQQCQSFPT HRDQSNDVPM DVEQGSRSHQ SAIAVDRSSY DGYNWRKYGQ KQVKGSEYPR 180 SYYKCTHPSC PVKKKVERSL EGHIAEIVYK GEHNHPKPQP PKHLLSETVG NANADSSGNT 240 LSSNLNVERN DASESRLESH SEVGLSGIPS YSGKTGRHLT STCHSDVASG TADAESSRVS 300 SKRRRTEDQA SVGEGDQGEP DVSSDGYHWR KYGQKVVKGN PYPRSYYKCT GLKCKERRRG 360 EGGVGEEDDD EKEEEEMGWC PCNGRKKAKK KGQRPAPSES AKVNPPPSDI EKQKSWEAKE 420 ALKESSLEVS KELTMQNSVE AKKEDSDNCS EHIAAQTFTF RELAAATRNF RVDCLLGEGG 480 FGRVYKGKIE GVNQIVAIKQ LDRNGLQGNR EFLMEVLMLS LLHHPNLVNL IGYCADGDQR 540 LLVYEYMPLG SLEDHLHDLT SDKKHLDWNT RMKIAAGAAK GLEHLHDKGN PPVIYRDLKC 600 SNILLGEGYY PKLSDFGLAK LGPVGDNTHV STRVMGTYGY CAPEYAMTGQ LTLKSDVYSF 660 GVVLLELITG RKAIDNSRAS GEHNLVAWAR PLFKDRRKFT QMADPVLQGK YPARGLYQAL 720 AVAAMCVQEQ PTIRPLIADV VTALTYLASQ NYDPETQTAQ SNPRLMTPGT PPRSKRCQ

Sequence ? help Back to Top

Protein Sequence Length: 778 aa Download sequence

MEDKNKEKTV VVKPVPWRPR SDFKSSKHTT TAGNVSSPSS STEATNIIRP KTVRLRPSSN  60
HFQAEIGPFL DHLSEPGAHD FSNLASKADA SSFLPNLGNV DVGHEEMFVE TMVQDQVLDR  120
SKQQCQSFPT HRDQSNDVPM DVEQGSRSHQ SAIAVDRSSY DGYNWRKYGQ KQVKGSEYPR  180
SYYKCTHPSC PVKKKVERSL EGHIAEIVYK GEHNHPKPQP PKHLLSETVG NANADSSGNT  240
LSSNLNVERN DASESRLESH SEVGLSGIPS YSGKTGRHLT STCHSDVASG TADAESSRVS  300
SKRRRTEDQA SVGEGDQGEP DVSSDGYHWR KYGQKVVKGN PYPRSYYKCT GLKCKERRRG  360
EGGVGEEDDD EKEEEEMGWC PCNGRKKAKK KGQRPAPSES AKVNPPPSDI EKQKSWEAKE  420
ALKESSLEVS KELTMQNSVE AKKEDSDNCS EHIAAQTFTF RELAAATRNF RVDCLLGEGG  480
FGRVYKGKIE GVNQIVAIKQ LDRNGLQGNR EFLMEVLMLS LLHHPNLVNL IGYCADGDQR  540
LLVYEYMPLG SLEDHLHDLT SDKKHLDWNT RMKIAAGAAK GLEHLHDKGN PPVIYRDLKC  600
SNILLGEGYY PKLSDFGLAK LGPVGDNTHV STRVMGTYGY CAPEYAMTGQ LTLKSDVYSF  660
GVVLLELITG RKAIDNSRAS GEHNLVAWAR PLFKDRRKFT QMADPVLQGK YPARGLYQAL  720
AVAAMCVQEQ PTIRPLIADV VTALTYLASQ NYDPETQTAQ SNPRLMTPGT PPRSKRCQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	5e-58	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr12801.1