PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr12434.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 85aa MW: 9777.06 Da PI: 9.3331

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr12434.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.9e-09	12	51	15	54
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++N+ +++L+ llP++ + + + s + +L+++++YIksL Dr12434.1 12 EMNELISKLQNLLPESRRRNTSRASASKVLKETCNYIKSL 51 79***********75777777**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 85 aa Download sequence
MSSRRTRITE EEMNELISKL QNLLPESRRR NTSRASASKV LKETCNYIKS LHREVDGLSD 60 RLSELINTMD NDSAQAEIIR GLLRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26945.1	3e-24	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr12434.1