PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr11979.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 740aa MW: 83881.2 Da PI: 7.0603

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr11979.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.9	1e-32	508	594	45	128
NAM 45 wdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 w++ k+k +ekewyf++++d+ky+tg r+nrat+sgyWkatgkdke+l+ + lvg+kktLvfy+grapkgekt+Wvmhe+rl Dr11979.1 508 WKITpyCKAKMGEKEWYFYCQKDRKYPTGMRTNRATESGYWKATGKDKEILRGkASLLVGMKKTLVFYRGRAPKGEKTNWVMHEFRL 594 55532336677999***********************************9634556*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MEFPFGHRHH HHQCCDEDPK PNPPPAYQSS PYATNEYPPP PSSYQPGYGP PPPPYGGGPD 60 QPSYPYQRPP SHAHHASHEN YSSIASLLRQ PSVRVYTTAD ENYSLSIRDG QVVLVPANPR 120 DEYQHWIKDM KYSTRVKDEE GFPAFALVNK VTGEAIKHSV GATQPVRLVP YNPDYLDESV 180 LWAESKDTGG GFRCIRMVNN IRLNFDAFHG DEDHGGVRDG TTVVLWEWLK GKNQRWKIAP 240 YLVLFRSSIM EFPFGHHHHH HHRSEEEEEG RNPYPPPSHQ PYSHPSNEYP PPPPPSYGTP 300 GQPPVQHVAH EPGHGYAPPP PGSYAPHGGG PVSHPYPHSQ APFQAHHVSH ESHNSAALIR 360 NQPTVRVYTK AEENYSLSIR DGKVILARAN PRDEYQHWVK DLRYSTRVKD AEGFPGFALV 420 NKVTGEAIKH SIGATHPVRL VPYNPDYLDE SILWAESNDT GEGFRCIRMV NNIELNFDAF 480 NGDEDHGGVR DGTIIVLWEW TKGKNQXWKI TPYCKAKMGE KEWYFYCQKD RKYPTGMRTN 540 RATESGYWKA TGKDKEILRG KASLLVGMKK TLVFYRGRAP KGEKTNWVMH EFRLHAKSSS 600 KDEWAVCKVF HKNNGVKKNT LMVNSRGEDQ LLDYTSLSPT LPPLTDDQGF IPCSSNNNQS 660 MMNTVYNCYY PQVAPQNSYF QPSGLDQEAM LRACGFGKEC KMEQVSLSQD TGLSTDRNID 720 DFDDPCSSAQ VLDFESLWKY

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MEFPFGHRHH HHQCCDEDPK PNPPPAYQSS PYATNEYPPP PSSYQPGYGP PPPPYGGGPD  60
QPSYPYQRPP SHAHHASHEN YSSIASLLRQ PSVRVYTTAD ENYSLSIRDG QVVLVPANPR  120
DEYQHWIKDM KYSTRVKDEE GFPAFALVNK VTGEAIKHSV GATQPVRLVP YNPDYLDESV  180
LWAESKDTGG GFRCIRMVNN IRLNFDAFHG DEDHGGVRDG TTVVLWEWLK GKNQRWKIAP  240
YLVLFRSSIM EFPFGHHHHH HHRSEEEEEG RNPYPPPSHQ PYSHPSNEYP PPPPPSYGTP  300
GQPPVQHVAH EPGHGYAPPP PGSYAPHGGG PVSHPYPHSQ APFQAHHVSH ESHNSAALIR  360
NQPTVRVYTK AEENYSLSIR DGKVILARAN PRDEYQHWVK DLRYSTRVKD AEGFPGFALV  420
NKVTGEAIKH SIGATHPVRL VPYNPDYLDE SILWAESNDT GEGFRCIRMV NNIELNFDAF  480
NGDEDHGGVR DGTIIVLWEW TKGKNQXWKI TPYCKAKMGE KEWYFYCQKD RKYPTGMRTN  540
RATESGYWKA TGKDKEILRG KASLLVGMKK TLVFYRGRAP KGEKTNWVMH EFRLHAKSSS  600
KDEWAVCKVF HKNNGVKKNT LMVNSRGEDQ LLDYTSLSPT LPPLTDDQGF IPCSSNNNQS  660
MMNTVYNCYY PQVAPQNSYF QPSGLDQEAM LRACGFGKEC KMEQVSLSQD TGLSTDRNID  720
DFDDPCSSAQ VLDFESLWKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	5e-58	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr11979.1