PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11830.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 385aa    MW: 41298.5 Da    PI: 7.2578
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11830.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.33.2e-12139183347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + k+lG+g W+ Iar +   R++ q+ s+ qky
        Dr11830.1 139 PWTEEEHRMFLLGLKKLGKGEWRGIARNFVVSRSPAQVASHAQKY 183
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MTRKCSSCSH NGHNARTCSA RGVKLFGVRL TDGAIRKSAS MGNLSHCAGL NIGGCGSLPA  60
DGLENGGRAA DGYASEGFVK GSSSSCAARK KDVEQNFIFL IDHDVLDVKL SGFLHNDGIC  120
MFWVLPCSVV AKMCIGGVPW TEEEHRMFLL GLKKLGKGEW RGIARNFVVS RSPAQVASHA  180
QKYFLRQMNT SGRKRRSSLF DMITDEVCIF YSSTSNSCTL FSASETQQNP TDGSEEAEAQ  240
GQNQQPPLPP LPDDESESMD SSTNDLQTST PAPVPAPVPA PSTYPVVYPA YFMPVFLPTP  300
YWPSYQLDSA GKEVHGIVRP TAVHPNTPID VNELMGMSQL SLGDSIGRPP SALSLGGSDR  360
QSAFHANPPR KDTSTKSGAS PIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.13e-55MYB_related family protein