PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11721.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ARF
Protein Properties Length: 922aa    MW: 103094 Da    PI: 5.1772
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11721.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.32.9e-23167267299
                EEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
         B3   2 fkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                +k lt sd++++g +++p++ ae+       ++++++ ++l+++d + + W++++iyr++++r++lt+GW++Fv+a++Lk+gD v+F   ++++ +l+++
  Dr11721.1 167 CKNLTASDTSTHGGFSMPRRAAEKLfppldySMQPPN-QELIVRDIHDNLWTFRHIYRGQPKRHLLTTGWSSFVSAKHLKAGDAVLFI--RDEKSQLLLG 263
                6899******************999*****9555555.49************************************************..4567778999 PP

                EE-S CS
         B3  96 vfrk 99 
                v+r+
  Dr11721.1 264 VRRA 267
                9997 PP
2Auxin_resp115.74.2e-38292374183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa++ s+F+v+YnPra++seF+v+++k++k  +++vs+GmRf m+fete+ss+rr++Gt+vg+sd+dp+rWpnS+Wr+L+
   Dr11721.1 292 AAHAAASCSPFTVYYNPRACPSEFIVPLDKYNKLAYTPVSIGMRFGMMFETEESSKRRYMGTIVGISDYDPLRWPNSRWRNLQ 374
                 79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 922 aa     Download sequence    
MISRDHAAHP DRPIPACASG QKARAELEKH RARVVHAGNV LDEMKLSAEI QNNAVVRKVI  60
NSELWHACAG PLVSLPQPGS LVYYFPQGHS EQVTVSTKRT LNSQIPNYPT LSSQLMCRVH  120
NVTLHACGDN DEVYAQITLQ PVNSEMDMFS IPETGHTRSK QPSEFLCKNL TASDTSTHGG  180
FSMPRRAAEK LFPPLDYSMQ PPNQELIVRD IHDNLWTFRH IYRGQPKRHL LTTGWSSFVS  240
AKHLKAGDAV LFIRDEKSQL LLGVRRASRQ LTTMPSSVLS ADSMHIGVLA AAAHAAASCS  300
PFTVYYNPRA CPSEFIVPLD KYNKLAYTPV SIGMRFGMMF ETEESSKRRY MGTIVGISDY  360
DPLRWPNSRW RNLQVEWDEH GYGERPNRVS LWEIETPESL FVVPATTPYL KRQCLPGFIV  420
PGLQIGSLNS KPLLQVPENR NAQVKPLFYS NDPVQLLKVL QQTHTSNQNK HLVSEQTMYA  480
SIFQSIRGTA DISKTVSWAS QPISSISNEV PHGMIVTKSV IEKNEQNMLL ENXKLLPSIV  540
QQSDELSINK SSSEREFQLQ SEDTDLENHN GGNSVQESLV TBMLXNKCFE MEGDSSHLLF  600
QQLEPIVSHS SVMETSESLD KEGYSTSHYL NEENWFSNLS ETTSSLSGDL CTIINPENLD  660
SFDICLPAFM QEFFSPPDLI PLADDDLVVH RTETNSSTEN XAQSENLENQ NSPACTEKQG  720
IGSCVSSSIT GNCSGFNGST LQCPPDSLID NRNSNQDFQS QVKSLQDIPE SSRGTSSASD  780
SCVNRCTRKS ISQQPLRTYT KVQKAGSVGR SIDITQFRNY QELKSAIACM FGLEGQFDDP  840
NGSEWKLVYV DYENDILLVG DDPWEEFINC VRCIKILSLL EVQQMSKEGM NLINTSNVNQ  900
VNRNPYWEDG SDDLDFPSNM AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein