PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr10890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB | ||||||||
Protein Properties | Length: 248aa MW: 28328.2 Da PI: 8.6923 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.4e-17 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv++v ++G ++W+ a+ g++Rt+k+c++rw +yl Dr10890.1 11 KGPWTEQEDMQLVCYVSLFGERRWDFLAKVSGLNRTGKSCRLRWVNYL 58 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.6 | 5.2e-17 | 64 | 109 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T+ E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ Dr10890.1 64 RGRMTPHEERLVLELHSRWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 109 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MVGVMKEETR KGPWTEQEDM QLVCYVSLFG ERRWDFLAKV SGLNRTGKSC RLRWVNYLHP 60 GLKRGRMTPH EERLVLELHS RWGNRWSRIA RKLPGRTDNE IKNYWRTHMR KKAQERRRNG 120 IMLSPTSSKT SSTSSSSSSS SSSSTTSSCC SSCLTTPPLK STQASGGEEM MKKECSLDEF 180 WKEIASTSEA VNGLSFEDCK DEVYGNICCY PPIPSPVCEY YSLWKIDEEE LRMFPPMGGP 240 PSHLTNMN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 1e-75 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr10890.1 |