PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10693.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 650aa MW: 70637.6 Da PI: 6.5121

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10693.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.3	1.1e-31	263	320	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C++kk++ers+ d++++e++Y+g+H+h+k Dr10693.1 263 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCQMKKQLERSH-DGQITEVVYKGHHDHPK 320 8**************************************.*************85 PP
2	WRKY	106.6	1.3e-33	440	498	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++dpk+v++tYeg+Hnh+ Dr10693.1 440 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHD 498 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MIEDLASSAG DPSDGAPQSX SXSQELRFDG FGTGNGAPLM EDQTRREGHL DPRVPAGSGV 60 GGAKYKSMSP AQLPISRSLR LTIPSGFSPS ALLESPVLLT NMKAEPSPTT GTFFMPSIXR 120 GPANSAMLSS PRDKSEXDGH FGSFEFRPNT RSNLSCLAPS SSAXLKQQGN ETNVKXQSQS 180 LSQQWSGSQL VKAENTAFSS NDLMLTGPDP SIETVAVKVN VSSAEAVSTG LQEARDSDNG 240 ELIALQPDGT GSMPSALADK LSDDGYNWRK YGQKHVKGSE FPRSYYKCTH PNCQMKKQLE 300 RSHDGQITEV VYKGHHDHPK PQPNRRIAIG SVLLNQGEEK TDGFSSLVND EEKLPNARGQ 360 ISYHADANGN PELSPVSVSD EDAEIGGARP SHVGEDGVDG DDPESKRRKK DMGIIDATQV 420 GKVNREPRVV VQTVSEVDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTNTG CPVRKHVERA 480 SHDPKAVITT YEGKHNHDVP ASRNSCHETT APPLIGAGMN TLNSHMTVSL NGILRTCDMR 540 SISHHYNQSD EADTLSLDLG VGISPRQNSS NEKLHAPDTQ QTQNQMHLTM SDYNKSVAQA 600 TPMPMLYGSS SHNLYRSRED KEEGFTFNTP AINHAANQYF PNPGNLVMGP

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MIEDLASSAG DPSDGAPQSX SXSQELRFDG FGTGNGAPLM EDQTRREGHL DPRVPAGSGV  60
GGAKYKSMSP AQLPISRSLR LTIPSGFSPS ALLESPVLLT NMKAEPSPTT GTFFMPSIXR  120
GPANSAMLSS PRDKSEXDGH FGSFEFRPNT RSNLSCLAPS SSAXLKQQGN ETNVKXQSQS  180
LSQQWSGSQL VKAENTAFSS NDLMLTGPDP SIETVAVKVN VSSAEAVSTG LQEARDSDNG  240
ELIALQPDGT GSMPSALADK LSDDGYNWRK YGQKHVKGSE FPRSYYKCTH PNCQMKKQLE  300
RSHDGQITEV VYKGHHDHPK PQPNRRIAIG SVLLNQGEEK TDGFSSLVND EEKLPNARGQ  360
ISYHADANGN PELSPVSVSD EDAEIGGARP SHVGEDGVDG DDPESKRRKK DMGIIDATQV  420
GKVNREPRVV VQTVSEVDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTNTG CPVRKHVERA  480
SHDPKAVITT YEGKHNHDVP ASRNSCHETT APPLIGAGMN TLNSHMTVSL NGILRTCDMR  540
SISHHYNQSD EADTLSLDLG VGISPRQNSS NEKLHAPDTQ QTQNQMHLTM SDYNKSVAQA  600
TPMPMLYGSS SHNLYRSRED KEEGFTFNTP AINHAANQYF PNPGNLVMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-133	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr10693.1