PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10601.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 272aa    MW: 31175.4 Da    PI: 4.9545
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10601.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.5e-101972371055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Dr10601.1 197 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 237
                9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEFFSYDQSD LVSQFILDDH HSMFWFDHET EINADLSSCF VSEDNSSSYD DNYFKSFFSA  60
EDHQQVFQDV HNQQLQERTF TDDFGVSGSK RKFHISDNEV AIHAEIPEKK PRATTKKRNL  120
SMKLQRSAII EDVKESSLTV NGQSSSSYSS EDDSNVSQEI NGGNFSKKCS DATIDNLNGK  180
TRANRGSATD PQSLYARKRR ERINERLRIL QNLVPNGTKV DISTMLEEAV QYVKFLQLQI  240
KLLSSDEMWM YAPIAYNGMD IGLDLNNSQL KR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.19e-46bHLH family protein