PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10403.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 291aa MW: 33308.9 Da PI: 8.9094

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10403.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.7	1.8e-07	98	142	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +rEr RR+++ + ++eL ++l + K +K +i++ A Y+k+L Dr10403.1 98 HMMRERHRREKLSQNYSELYSILAPX-----SKADKNSIVQSAAVYLKEL 142 889******************997.....69************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MDSFWCQKEF LEGATLNYSF SPAPPINVVA GISENNSLII APTSAFKRYF RPLNIIQKCD 60 HSPNVHQRVI SFLKSIWKPN PKPKICEIDD VGSRDFRHMM RERHRREKLS QNYSELYSIL 120 APXSKADKNS IVQSAAVYLK ELLMIKEELH RQNKMLREKI IDTGNILQSK GLDSRTEHKM 180 KDDNMSIEEA KIEVQLMNPV STXDSMIEAL QCMKGMGVKA MSIHSEFYGD EFTTMMTIYT 240 KVEKSEERGV EGTPVEMERK MRLQLAITKK GSVDPNKAAT TTTSPCGQWR T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	3e-22	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr10403.1