PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10402.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 342aa    MW: 38321.3 Da    PI: 9.7183
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10402.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-31255312359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYegeHnh+
  Dr10402.1 255 DDFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCLEDPSMLIVTYEGEHNHT 312
                99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MLKMEEVEEA NRVAVESCHG VLNLISQSNE LPYRTLMAET DEAVSKFKKV ISLLSHGVGH  60
ARVKRFKKTE EFFPFDQNQN QTFLDYQLLF STSSSSSCQP LRVLKNVHQN QILDLSSASR  120
NALQQHHHQQ QQQQQMRFQA EMFRRHNSGI NLKFDNSSCT GTGSSTRSFV SSLSMDGSGA  180
SLDGKSFHLI SGPQSSEPVN LHANTQRRCL GKGEHGSGKC ASSGRCHCSK KRKHRVKRSI  240
KVPAISNKLA DIPPDDFSWR KYGQKPIKGS PHPRGYYKCS SVRGCPARKH VERCLEDPSM  300
LIVTYEGEHN HTNSVTQKLG ILEFCMDLQV KDFSGGNQIA LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.13e-85WRKY family protein