PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10352.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 472aa MW: 53020.9 Da PI: 9.6931

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10352.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	60	4.4e-19	166	214	1	48
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvv 48 ++Dgy+WrKYGqK+ +++++pr+Y+rC++a C+vkkk e +e++k + Dr10352.1 166 VKDGYQWRKYGQKVTRDNPCPRAYFRCAFApACQVKKKRESHKEETKSL 214 58*************************99******9999888765 PP
2	WRKY	89.3	3.1e-28	342	401	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y+rC++a C+vkkkv+rsaed+++++ tYeg+H+h Dr10352.1 342 VKDGYQWRKYGQKVTRDNPCPRAYFRCAFApACQVKKKVQRSAEDQSILVATYEGDHTHG 401 58*************************99**************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MEFKPMDASS LCLDLSVGPR SSSSSPLRES HKEETKSLIK EEVGALRAEL NRVSKENEKL 60 TEMLQTMYVN YRSLQSKMAE LMTESSEKRS VSPSASASPV KKRKSESLET NSNIVADNPN 120 GMINFIRYHT ETTSSCDSLK PIKDDSRPKI SKVYVRTDAS DSSLIVKDGY QWRKYGQKVT 180 RDNPCPRAYF RCAFAPACQV KKKRESHKEE TKSLIKEEVG ALRAELNRVS KENEKLTEML 240 QTMYVNYRSL QSKMAELMTE SSEKRSVSPS ASASPVKKRK SESLETNSNI VADNPNGMIN 300 FIRYHTETTS SCDSLKPIKD DSRPKISKVY VRTDASDSSL IVKDGYQWRK YGQKVTRDNP 360 CPRAYFRCAF APACQVKKKV QRSAEDQSIL VATYEGDHTH GQPSRPEKNN GTAAIVPPTP 420 TKKKACRSDE SPEIQWRLVE QMASSLTKDP TFTAALASAI SDKMLDHSPS RS

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MEFKPMDASS LCLDLSVGPR SSSSSPLRES HKEETKSLIK EEVGALRAEL NRVSKENEKL  60
TEMLQTMYVN YRSLQSKMAE LMTESSEKRS VSPSASASPV KKRKSESLET NSNIVADNPN  120
GMINFIRYHT ETTSSCDSLK PIKDDSRPKI SKVYVRTDAS DSSLIVKDGY QWRKYGQKVT  180
RDNPCPRAYF RCAFAPACQV KKKRESHKEE TKSLIKEEVG ALRAELNRVS KENEKLTEML  240
QTMYVNYRSL QSKMAELMTE SSEKRSVSPS ASASPVKKRK SESLETNSNI VADNPNGMIN  300
FIRYHTETTS SCDSLKPIKD DSRPKISKVY VRTDASDSSL IVKDGYQWRK YGQKVTRDNP  360
CPRAYFRCAF APACQVKKKV QRSAEDQSIL VATYEGDHTH GQPSRPEKNN GTAAIVPPTP  420
TKKKACRSDE SPEIQWRLVE QMASSLTKDP TFTAALASAI SDKMLDHSPS RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	3e-59	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr10352.1