PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09321.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 266aa    MW: 28278.2 Da    PI: 4.5732
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09321.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-3058116259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+++Hnh+
  Dr09321.1  58 TDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLVVTYSSDHNHP 116
                69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDDNGTATTY EVEEPGSSDG PSPKKSRRTV EKRVVSVPIG GDGDGPRNKA GGEAAPPTDS  60
WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRV DPTMLVVTYS SDHNHPWPLP  120
KNQHAGAAVT SRVSPKSKAA AVEEADPGPI QPDPEERFTD LIAGDMLGGV EFGGVWFSDV  180
GSPSPSASPT EGSDDTMLYG SIAGCSAGIL FLDDSEEKVE REWEKEEEED SLFAGLGELP  240
ECSMVFRRGF QAAATATVTA AASSGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.15e-51WRKY family protein