PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09182.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 328aa MW: 37472.9 Da PI: 7.452

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09182.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163	1.1e-50	8	156	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel. 99 lppGfrFhPtdeel+ +yL++++++ + + +i++vdiyk++PwdLp+k+k +e+ewyfF++rd+ky++g r+nra++sgyWkatg+dk+++s++++ Dr09182.1 8 LPPGFRFHPTDEELILHYLRRRASAADSSPVPIIADVDIYKFNPWDLPSKAKFGEREWYFFTPRDRKYPNGVRPNRAAASGYWKATGTDKPIHSTSSSSa 107 79*******************9999777689***********99999*************************************833335 PP NAM 100 ....................vglkktLvfykgrapkgektdWvmheyrl 128 +g+kk Lvfykg+ pkg+kt+W+mheyrl Dr09182.1 108 sssssstsltpttvthphscIGVKKALVFYKGKPPKGSKTNWIMHEYRL 156 56677888999999999999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MTNPTATLPP GFRFHPTDEE LILHYLRRRA SAADSSPVPI IADVDIYKFN PWDLPSKAKF 60 GEREWYFFTP RDRKYPNGVR PNRAAASGYW KATGTDKPIH STSSSSASSS SSSTSLTPTT 120 VTHPHSCIGV KKALVFYKGK PPKGSKTNWI MHEYRLISQP QIPIHSFKPF PLRDSSMRLD 180 DWVLCRIYKK NYHVSNERDH EQEEEEGEEE DKHSLIITKH DHDHHLHKSS SLSELLNQLF 240 DNPSEILGTL EQNDHDHHQV LLNVNNITAT ENCHKRLLED GGDHHQPSFK KINTSTTTTT 300 TTSSCLMMNQ PFLFNQQILL NSHLGLHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	2e-76	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr09182.1