PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09181.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 357aa MW: 40682.4 Da PI: 9.125

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09181.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	186.5	6.1e-58	31	158	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +ppGfrFhPtdee++++yL++kv ++ +++ ++i +vd++k+ePwdLp+k+k +ekewyfF++rd+ky+tg r+nrat+sgyWkatgkdke+++++g lv Dr09181.1 31 MPPGFRFHPTDEEIISHYLTPKVLNHGFTA-RAIGQVDVNKCEPWDLPSKAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKSRGVLV 129 79***********************999.89***********99999******************************************* PP NAM 101 glkktLvfykgrapkgektdWvmheyrle 129 g+kktLvfy+grapkgekt+Wvmheyrle Dr09181.1 130 GMKKTLVFYRGRAPKGEKTNWVMHEYRLE 158 *************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MICRSARRKK FSEGVIRVLV MADDHQECLD MPPGFRFHPT DEEIISHYLT PKVLNHGFTA 60 RAIGQVDVNK CEPWDLPSKA KMGEKEWYFF CQRDRKYPTG MRTNRATESG YWKATGKDKE 120 IFKSRGVLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK TPNLLLKTSK DEWVVCRVFH 180 KSTGGGGGGV GMVKKSPMAL LDSPTLPPLM DPMPSFIPDV LPSFIHPSPI FQISHDHQNN 240 NNNNNNNNNN SMMMMNPQMY PQINAPCPNL GYLHHDQAMI RALVASTEHA SSSLIKRQQQ 300 CKVEQLSNQS ILSQDTGMST DRNTEISSVF STKNEINNYV SSSRSYDDLD LENLWKY

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MICRSARRKK FSEGVIRVLV MADDHQECLD MPPGFRFHPT DEEIISHYLT PKVLNHGFTA  60
RAIGQVDVNK CEPWDLPSKA KMGEKEWYFF CQRDRKYPTG MRTNRATESG YWKATGKDKE  120
IFKSRGVLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK TPNLLLKTSK DEWVVCRVFH  180
KSTGGGGGGV GMVKKSPMAL LDSPTLPPLM DPMPSFIPDV LPSFIHPSPI FQISHDHQNN  240
NNNNNNNNNN SMMMMNPQMY PQINAPCPNL GYLHHDQAMI RALVASTEHA SSSLIKRQQQ  300
CKVEQLSNQS ILSQDTGMST DRNTEISSVF STKNEINNYV SSSRSYDDLD LENLWKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	1e-100	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr09181.1