PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09121.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family G2-like
Protein Properties Length: 296aa    MW: 32195.4 Da    PI: 7.9711
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09121.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.81.6e-3093146155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Dr09121.1  93 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 146
                59*******************.********************************8 PP
2Myb_DNA-binding48.22.5e-1595145148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
        Dr09121.1  95 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 145
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MRADEKKDVK DENPRWFSRW EDQLPSPDEL MPLSQSLITA DLARAFDLTS SPRRSPSLPP  60
PSAVAAPLPD FDAPDLAVSG ADGADEPART LKRPRLVWTP QLHKRFVDAV AHLGIKNAVP  120
KTIMQLMSVD GLTRENVASH LQKYRLYLKR MQGLGAAGGG PASADDQLFA SAPVPHHFLA  180
RGPADPFVAA LQQQQIAAAA VAAQQHQQQQ YYQQQQQRHL GYLGSPPGSG YDRGYLARAV  240
PPPALHRMVD PVGVGAVRPS PPQPPPSSVG FYQEDFETGA GGGERRVLTL FPTKEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05090.12e-56G2-like family protein