PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr08997.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | DBB | ||||||||
Protein Properties | Length: 240aa MW: 26357.9 Da PI: 4.7661 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 24 | 7.8e-08 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e+H H++ Dr08997.1 4 QCDACEKSPATVICCADEAALCASCDVEIHAAnklaskHQR 44 7*****************************65667777765 PP | |||||||
2 | zf-B_box | 29.2 | 1.9e-09 | 53 | 85 | 2 | 34 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeH 34 + ++C+ ++ek++ +fC +++ l+C++C + +H Dr08997.1 53 KLPRCDICQEKPAFIFCVEDRALFCRECDEPIH 85 789***************************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MKIQCDACEK SPATVICCAD EAALCASCDV EIHAANKLAS KHQRLLLQCL SNKLPRCDIC 60 QEKPAFIFCV EDRALFCREC DEPIHVAGSL SGNHQRFLAT GIRVALSSGC NNDINKECFE 120 PPNRHAPLQA PNNLSTQQTP SAFTQSAWAV DEFLQLSDYE SADKKETPAG IGELEWFTDI 180 GLFQGQGHKG MLSAAEVPEL VIPQASNAPS YRPTKSNMPL KKLRIELSDD EEYFTVPDLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06040.1 | 4e-95 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr08997.1 |