PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08791.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 318aa    MW: 34250.1 Da    PI: 7.93
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08791.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.74.6e-1294138347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r +   R++ q+ s+ qky
        Dr08791.1  94 PWTEEEHRMFLIGLQKLGKGDWRGISRNFVVSRSPTQVASHAQKY 138
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MTRRCSACSH NGHNSRTCPG RGVKIFGVRF TDGAIRKSAS MGNLSHYAGS GSVGGGSSPA  60
DGPEHGGAAA DGYASEDFAQ GSSSSCRERK RGVPWTEEEH RMFLIGLQKL GKGDWRGISR  120
NFVVSRSPTQ VASHAQKYFI RQANASRRKR RSSLFDIVHD EAADAPPCTV TGKEPTTQGN  180
NPPSCPDEEC ESMDSNNIEE TLPKPVCPMP APCTYPMIYP AYFSPFFPFP HPCWPGYIQD  240
GAEKETHEIV KPTATHSKTT PINIDELIGM SKLSIGDSTG QSPSSLLLGQ SDRQSAFQPN  300
LPSRDAAMNS STSPIRAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-100MYB_related family protein