PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr08175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | bHLH | ||||||||
Protein Properties | Length: 186aa MW: 21346.7 Da PI: 8.6486 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.9 | 1.8e-08 | 9 | 61 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC.....TTS-.STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkas..kapskK.lsKaeiLekAveYIksL 54 + E++RR +++ eL +l+P+ + +sk s L +A +YIk+L Dr08175.1 9 RKVLEKKRRIQMKALCLELNSLIPNENkdSSSSKSsSSQLHLLDQAAKYIKEL 61 5789*********************5557444444589999**********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MVPLMKVERK VLEKKRRIQM KALCLELNSL IPNENKDSSS SKSSSSQLHL LDQAAKYIKE 60 LRERVDTLKE MKKIKINNNN NNNNVNSNDD EEMPVIQVKK VDSNLEVVLV SKLNKQVMFH 120 EVIRVLGEEG AEINNASFSI VGDKIFHTIH SQVNCSGMDF NCPAMLERLQ ELVHRRDALC 180 SRKMQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 4e-18 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr08175.1 |