PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr07865.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 250aa MW: 27961.8 Da PI: 9.4977 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.4 | 1.2e-18 | 106 | 160 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +k+ ++tk+q Lee F+++ +++ ++++ LAk+l+L rqV vWFqNrRa+ k Dr07865.1 106 KKKLRLTKDQSALLEERFKEHTTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 160 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 117.6 | 7.2e-38 | 106 | 195 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k+q++lLEe F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E d+e Lkr++++l++en+rL++ev+eL+ +l Dr07865.1 106 KKKLRLTKDQSALLEERFKEHTTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTELDCELLKRRCETLNDENQRLQREVQELK-AL 195 59*************************************************************************************9.44 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MDKGYGVCDT GLALGLGYKR KSTSLNQSFI SGMSSLEPML TLGLSGDPYG SPTMSKVFKE 60 STQSPVSSFS NANPRSIKSE EIIGEETGTE KVSPRGSDDD EEVCAKKKLR LTKDQSALLE 120 ERFKEHTTLN PKQKQALAKQ LNLRPRQVEV WFQNRRARTK LKQTELDCEL LKRRCETLND 180 ENQRLQREVQ ELKALKLKSP LFMQFLKTSP MICPACERIT GGDSPKGGPL MVAPPKHXFF 240 NPFTTHSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 155 | 163 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-68 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr07865.1 |