PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07832.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 296aa MW: 32963.2 Da PI: 5.8772

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07832.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	36.6	1e-11	68	91	2	25
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 rlrWt++LH+rFv+a++qLGG++ Dr07832.1 68 LRLRWTSDLHDRFVDAINQLGGPD 91 69********************98 PP
2	Myb_DNA-binding	55.2	1.7e-17	69	136	1	48
TSSS-HHHHHHHHHHHHHTTTT...................-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...................tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++++vda++qlGg+ t+k + r mg g+t +++ks++qky+ Dr07832.1 69 RLRWTSDLHDRFVDAINQLGGPdsgrddncyslflimvseaTPKGVLRIMGvPGLTIYHVKSHLQKYR 136 89*****************************************************************7 PP
3	G2-like	50.5	4.6e-16	108	137	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk +l++m+v+gLt++hvkSHLQkYRl Dr07832.1 108 EATPKGVLRIMGVPGLTIYHVKSHLQKYRL 137 7****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MNLSCNVILV SMYHAKIVST TAMVPHKIHG TDGMLHSETQ GSNQLDDANV FGGSTAINAP 60 NSAGSGKLRL RWTSDLHDRF VDAINQLGGP DSGRDDNCYS LFLIMVSEAT PKGVLRIMGV 120 PGLTIYHVKS HLQKYRLAKF LPESSADGSK DDMENAKDTL SNTETLQGGQ ISEALRMQME 180 VQKRLQEQLE VQRQLQLRIE AQGKYLEKII EEQQKLSGAI KMCPPLKPGE KSKSFELLPP 240 PEXNLSDLPC CMKKLRTSDQ LPEHVDVPPR PDSNATRTEW NLEVYNEGEE GIRFDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-51	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr07832.1