PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07543.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 343aa MW: 37734.3 Da PI: 9.3639

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07543.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.4e-32	174	227	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Dr07543.1 174 PRMRWTTALHSRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 227 9****************************************************7 PP
2	Myb_DNA-binding	49	1.4e-15	175	226	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Dr07543.1 175 RMRWTTALHSRFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 226 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MRSQGVFMET TSISGPDLSL HISLPSTGAI DATGSSSAST ELSLSNHSSE NPQRWPQGSL 60 ARAAAPPPPQ DFHGMPFIQT PIKGIPIYNN NPFTFISTDK KMAFYKQASP TSSPFVDPMA 120 TYFQTIGGRP PPMSSSVKPQ LHQLAMVPLE ASSHSMMRSR FMPKLPPKRS MRAPRMRWTT 180 ALHSRFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKPTISSGG 240 QSDGSGEEDL ISGNGGDLNF RRSTDNQEPN GTSTWSNSSR GTWLHSSSNN METLRPDFSS 300 QNDQMQETDL LRPKNSPESN GKLKFPSLEF TLGRADWHGA EHD

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MRSQGVFMET TSISGPDLSL HISLPSTGAI DATGSSSAST ELSLSNHSSE NPQRWPQGSL  60
ARAAAPPPPQ DFHGMPFIQT PIKGIPIYNN NPFTFISTDK KMAFYKQASP TSSPFVDPMA  120
TYFQTIGGRP PPMSSSVKPQ LHQLAMVPLE ASSHSMMRSR FMPKLPPKRS MRAPRMRWTT  180
ALHSRFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKT TDKPTISSGG  240
QSDGSGEEDL ISGNGGDLNF RRSTDNQEPN GTSTWSNSSR GTWLHSSSNN METLRPDFSS  300
QNDQMQETDL LRPKNSPESN GKLKFPSLEF TLGRADWHGA EHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-56	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr07543.1