PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07423.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 320aa MW: 34617.2 Da PI: 6.9197

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07423.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1e-33	47	101	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Dr07423.1 47 RQRLRWTHELHERFVDAVTQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 101 58****************************************************8 PP
2	Myb_DNA-binding	64.3	2.3e-20	49	100	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ Dr07423.1 49 RLRWTHELHERFVDAVTQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 100 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MYQSKPISSL NSAHSSLMPH DQHLEMGGNS LGPDNGLNNS NSNVSSRQRL RWTHELHERF 60 VDAVTQLGGP DRATPKGVLR VMGVQGLTIY HVKSHLQKYR LAKYIPDSSS DGVKAEKKDS 120 GDILSGLENS SGMQITEAIK LQMEVQRQLQ LRIEAQGKYL KKIIEEQQRL SGVLADAPGL 180 SIRDPSSGDR CQDSDKTDPS TPAPTSESPL PDKATSDPGG ASTLFKSLSH DESFSSRREP 240 LTPDSGGRNA SPSNSPNHNR PTKRQRATTG SEPTKPELVL AHHIFESSSA SDFLQPCSIY 300 SSGTSAGDDD RFANASGSDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-105	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr07423.1