PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr07416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 206aa MW: 23790.3 Da PI: 8.2551 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 62.5 | 7.4e-20 | 3 | 58 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES.--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYeg.eHnhe 59 +Dgy+WrK+GqK+ + e++rsYY Ct+++C+vk++ve +a d+ v+ i+Y+g +H+h+ Dr07416.1 3 EDGYSWRKFGQKQ--SGENSRSYYYCTYPNCKVKRNVEYNA-DGVVTMIVYKGgDHKHS 58 8***********8..67899********************9.*********9648*997 PP | |||||||
2 | WRKY | 95.3 | 4.3e-30 | 134 | 192 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGq++v+g+ +pr+Y+rCt+ gC+v+k vers++++k+v++tYeg+Hnhe Dr07416.1 134 LDDGYRWRKYGQRTVRGNLNPRNYFRCTYLGCSVRKYVERSSSNEKAVITTYEGRHNHE 192 59********************************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 206 aa Download sequence |
MAEDGYSWRK FGQKQSGENS RSYYYCTYPN CKVKRNVEYN ADGVVTMIVY KGGDHKHSKP 60 DQPDHRQFST DVMNEEIKNE PIRLCDSPQP AFEGIELNFK RIKVEACATD LKSTSRAELE 120 PXFVIQTISE VDLLDDGYRW RKYGQRTVRG NLNPRNYFRC TYLGCSVRKY VERSSSNEKA 180 VITTYEGRHN HEVPAAYGSQ FCTSVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G30250.1 | 2e-57 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr07416.1 |