PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr07381.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 192aa MW: 21838.6 Da PI: 4.5211 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62 | 8.8e-20 | 25 | 78 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++e ++eLe+ Fe +++++ e++++LA +lgL+ rqV vWFqNrRa++k Dr07381.1 25 KKRRLEAEKVRELERSFEAQSKLDPERKARLACELGLEPRQVAVWFQNRRARWK 78 5668999**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 110.9 | 8.3e-36 | 24 | 112 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 ekkrrl++e+v+ LE+sFe+++kL+perK++la eLgl+prqvavWFqnrRAR+k k+lE+d++++++a dal+ + ++L++e+++L+ Dr07381.1 24 EKKRRLEAEKVRELERSFEAQSKLDPERKARLACELGLEPRQVAVWFQNRRARWKVKRLERDFSSMRAARDALELDVSALRRETSALAL 112 69**********************************************************************************99974 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MGFEEEEDEE EIGEDAYGGG APPEKKRRLE AEKVRELERS FEAQSKLDPE RKARLACELG 60 LEPRQVAVWF QNRRARWKVK RLERDFSSMR AARDALELDV SALRRETSAL ALEAAELRAK 120 LTARLSLGSP AEKPPAGEGI SPPLEQMIAV GLERKSISSE EYEPLDCAVK KGLFYEEELM 180 DYGWSLGCYE EW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 50 | 56 | ERKARLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 1e-28 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr07381.1 |