PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr06596.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB_related

Protein Properties

Length: 460aa MW: 51761.3 Da PI: 7.426

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr06596.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.4e-15	273	319	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT+eEd lv +++++G+ +W++I+ g++R+ k+ck rw +yl Dr06596.1 273 GPWTPEEDITLVSYIQEHGPSNWRAIPLNTGLKRCIKSCKFRWTNYL 319 89*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MNLIDNISMN SFLFNGAFNL QECSVRVGNN LNHVTLNNTI FDNVVKNBWA WHPISSKAST 60 VAAVYDYLTL RVLLLLFEKV GISFGNSRSP LALRPLFENW LMIPLKSWAG VQAFFFANXL 120 FSRNTFNPFQ LTHFSLSVYS DAAWDLLTGK AGFGFFISTN HNAILLAGAA XDFCASSLEA 180 KLQAILLALE HCRMNGWTPC KLFSDCHCAI QLINDFNDIT AWRFSYTIQA IMIITHSWPD 240 FSWEHIDRDF NTLTDRLAHY GSSKPQISLF VQGPWTPEED ITLVSYIQEH GPSNWRAIPL 300 NTGLKRCIKS CKFRWTNYLR PRIKHGNFTG QMEKLIIHFQ ALLGNSSFVS KRPFSIFHVI 360 TSNPSPFHGG AKDGDIGIDV HQFHTIMLPI ILDQFLSTEV YSEWSKVVVG VGEIMKTGDD 420 LSNFAGMMGI PEPGVKVVES EKNVRLTGDG NAIRGRNLGN

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MNLIDNISMN SFLFNGAFNL QECSVRVGNN LNHVTLNNTI FDNVVKNBWA WHPISSKAST  60
VAAVYDYLTL RVLLLLFEKV GISFGNSRSP LALRPLFENW LMIPLKSWAG VQAFFFANXL  120
FSRNTFNPFQ LTHFSLSVYS DAAWDLLTGK AGFGFFISTN HNAILLAGAA XDFCASSLEA  180
KLQAILLALE HCRMNGWTPC KLFSDCHCAI QLINDFNDIT AWRFSYTIQA IMIITHSWPD  240
FSWEHIDRDF NTLTDRLAHY GSSKPQISLF VQGPWTPEED ITLVSYIQEH GPSNWRAIPL  300
NTGLKRCIKS CKFRWTNYLR PRIKHGNFTG QMEKLIIHFQ ALLGNSSFVS KRPFSIFHVI  360
TSNPSPFHGG AKDGDIGIDV HQFHTIMLPI ILDQFLSTEV YSEWSKVVVG VGEIMKTGDD  420
LSNFAGMMGI PEPGVKVVES EKNVRLTGDG NAIRGRNLGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28910.1	7e-36	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr06596.1