PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06327.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family G2-like
Protein Properties Length: 335aa    MW: 36408.3 Da    PI: 5.523
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06327.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.81e-2797150256
    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 +++WtpeLH+rFv+aveqL G +kA+P++ile+m++++Lt+++++SHLQkYR++
  Dr06327.1  97 SKVDWTPELHRRFVQAVEQL-GVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 150
                5899****************.********************************86 PP
2Myb_DNA-binding38.33e-1299148248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT+e++ ++v+av+qlG +   +++I + mg   +t+ ++ s++qky+
        Dr06327.1  99 VDWTPELHRRFVQAVEQLGVDkaVPSRILEIMGiDCLTRHNIASHLQKYR 148
                      57********************************889************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MLAASPVRSS HGDGRELETV GFTCDGALLE DINFDELFMG FDEEDILPDL EVDPAEIFAE  60
FSASGEEDSA NTAPNPSASS ELEVPVVQEV PEVISNSKVD WTPELHRRFV QAVEQLGVDK  120
AVPSRILEIM GIDCLTRHNI ASHLQKYRSH RKHLLAREAE AASWSQRRQI YTGGGGGGGG  180
GGGVARRPEM SPWLAPTMGF PPAPPVQLFR PLHVWGHPTM DQPMLHVWPR TPSPQPLLHP  240
PPDPSFWHPH FPMRFAAAAP ALPGLYRPLN VIAPAGKQQS GSQTHPSKES IDAAIGDVLT  300
KPWLPLPLGL KPPSLDSVLV ELQRQGISKV PPTCG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20570.12e-62G2-like family protein