PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05969.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 303aa MW: 33420.2 Da PI: 7.0391

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05969.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.3	1.7e-28	115	164	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ Dr05969.1 115 PRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQ 164 9************************************************* PP
2	Myb_DNA-binding	43.4	7.6e-14	116	164	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q Dr05969.1 116 RMRWTTTLHAHFVHAVELLGGHeraTPKSVLELMNvKDLTLAHVKSHLQ 164 89**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MATATSTTFP DLSLQISPPS VTTTTTTGDE QAGRALIGDY NSMTDSGSSG GSEASHEQPM 60 FHRATRLSLG FDASQDNQIL DQRLVQHCHH PHPQIYEFKR NSKQGNGGKR SIRAPRMRWT 120 TTLHAHFVHA VELLGGHERA TPKSVLELMN VKDLTLAHVK SHLQVPWLDW MFAGQPAQVA 180 AAADMVVCVE KSGFIPSYTS LCSPTPPSQP LPNSNSNSPR GSYSSLEDNN WNPSIAPKAP 240 SNPYLTHENF QRDENKNTRV SQSENIESGS PKKLPNLDIT LGRQSWQMEH TESSNELTLL 300 RCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	2e-46	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr05969.1