PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr05926.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 239aa MW: 27044.6 Da PI: 8.5857 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.3 | 3e-19 | 98 | 152 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Le+ F++++ ++ ++++ LAk+l+L rqV vWFqNrRa+ k Dr05926.1 98 RKKLRLTKEQSSLLEKSFKEHPSLNPKQKQALAKHLNLRPRQVEVWFQNRRARTK 152 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 111.2 | 6.8e-36 | 98 | 185 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rl+keq++lLE+sF+e+ L+p++K++la++L+l+prqv+vWFqnrRARtk kq+E+d +Lk+++++l++en +L+ke +eL+ Dr05926.1 98 RKKLRLTKEQSSLLEKSFKEHPSLNPKQKQALAKHLNLRPRQVEVWFQNRRARTKFKQTEVDLVFLKKWFETLTDENLKLRKELQELK 185 69*************************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MDKGIEKEEE EGGGGEVCDI GLGLGLSNYK ESIVEPSLTL GLCVDAFGLE SKGKQTSLSQ 60 WKHCFGAKRN TEIQTDEAAT AKASFGRASD EEEDGGARKK LRLTKEQSSL LEKSFKEHPS 120 LNPKQKQALA KHLNLRPRQV EVWFQNRRAR TKFKQTEVDL VFLKKWFETL TDENLKLRKE 180 LQELKRYKFQ SSVNTKIATS TLSMCPKCQR MTGNDDGDHA VLQSSKPFFF DHFPYSATC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 147 | 155 | RRARTKFKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-44 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr05926.1 |