PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05871.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 286aa    MW: 32714.7 Da    PI: 5.4324
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05871.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.41.4e-18117169859
                EEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSS.TTEEEEEEES--SS- CS
       WRKY   8 rKYGqKevkgsefprsYYrCtsagCpvkkkversaed.pkvveitYegeHnhe 59 
                rKYG K++k+s fpr YY+Ct ++C+++kkv++++++ p+ + ++Y  +H ++
  Dr05871.1 117 RKYGLKDIKNSMFPRTYYKCTNEECKARKKVQQQDKNmPSNFMVIYDMQHICN 169
                9******************************9988764799*********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MWGSCAHHQN RALTLREIRI KLWESRSTLE ANTLPKKEME QATNLLQEIM SSLLQSVTIL  60
NSIAAADQRI PYEDTATTVK RRRVHDSTRI VTTNPFCDGY QWKKYGEKDI KNSDFRRKYG  120
LKDIKNSMFP RTYYKCTNEE CKARKKVQQQ DKNMPSNFMV IYDMQHICNN TVQETKKNLL  180
SPSTSTINFG SILESSSFMM DNINQQEQTL SSISDQFQIT NTVLYNDNIS VAKAVQGAES  240
TGDNMAGIFS PLSPLDCNEI QNALELFNLV DHEDGSFAED EDDSLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18084KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.25e-13WRKY family protein